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Omics Data Automation national omics data encyclopedia node
National Omics Data Encyclopedia Node, supplied by Omics Data Automation, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/national+omics+data+encyclopedia+(node)/data+encyclopedia+national+omics/pm42276047-223-8-9
Average 86 stars, based on 1 article reviews
national omics data encyclopedia node - by Bioz Stars, 2026-10
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Article Title: Fusarium enrichment alters the soil microbial community and network structure of Brassica crops
Article Snippet: All raw sequences from the current study have been deposited in National Omics Data Encyclopedia (NODE) under the accession number OEP00006220 ( https://www.biosino.org/node/project/detail/OEP00006220 ) and the National Genomics Data Center (NGDC) under the GSA number CRA034764 ( https://ngdc.cncb.ac.cn/gsa ).

Article Title: Dendritic Cells Derived MMP9 Fuels Sepsis-Induced Cardiac Dysfunction Through JNK/AP1 Driven Pro-Inflammatory Cytokine and Nitric Oxide Storm.
Article Snippet: Statistical analysis was performed with unpaired two tailed 469 Student’s t test, or one-way analysis of variance (ANOVA) followed by 470 Tukey’s post-hoc test, or two-way analysis of variance 471 (ANOVA) with Sidak’s multiple-comparisons test and the log-rank test, in 472 GraphPad Prism (version 8.3.0; GraphPad Software Inc.).

Article Title: Fusarium enrichment alters the soil microbial community and network structure of Brassica crops.
Article Snippet: Data availability All raw sequences from the current study have been deposited in National Omics Data Encyclopedia (NODE) under the accession number OEP00006220 (https:// www. biosi no. org/ node/ proje ct/ detail/ OEP00 006220) and the National Genomics Data Center (NGDC) under the GSA number CRA034764 (https:// ngdc. cncb. ac. cn/ gsa).

Article Title: Paean: A unified and efficient transcriptome quantification system using heterogeneous computing.
Article Snippet: The rapid accumulation of RNA-seq data has raised a higher requirement on the performance of analytic methods.. However, existing data analysis pipelines, which are all developed on CPU architecture, take tremendous computational resource to analyze gene expression and alternative splicing in two different computation models, limiting the applications of large RNA-seq datasets.. We developed a parallel computing system on GPU-CPU platforms (Parallel analyzer, Paean), which integrates two efficient and highly parallel algorithms into one unified pipeline to facilitate rapid calculation of expression levels and alternative splicing ratios of all genes.

RNA Sequencing:

Article Title: Aberrant Kupffer-like differentiation of hematopoietic stem cell is critical for the MDS pathogenesis in Setd2-deficient mice.
Article Snippet: Histone methyltransferase SETD2 is recurrently mutated in hematopoietic malignancies.. Our previous study showed that Setd2 deficiency impairs the self-renewal potential of murine hematopoietic stem cells (HSCs) and drives myelodysplastic syndrome (MDS)-like disorders.. However, the precise oncogenic advantages conferred upon HSCs by Setd2 loss remain unclear.

Sequencing:

Article Title: Microbial drivers of ammonium accumulation in Holocene sediments of the Pearl River Delta.
Article Snippet: .. The raw metagenomic sequencing data generated in this study have been deposited in the National Omics Data Encyclopedia (NODE) under accession code OEP00006863 (https://www.biosino.org/node/browse?keyword=OEP00006863). ..

Article Title: Continuous leachate irrigation as an ammonia source enhancing methane oxidation in landfill biocover soils.
Article Snippet: Nitrogen amendment can help recover high methane (CH4) oxidation activity in landfill cover soils experiencing a post-peak decline.. Herein, the feasibility of leachate used as an ammonia-rich liquid to restore CH4 oxidation activity was assessed in landfill biocover soils in comparison with ammonia addition under both batch and continuous application modes.. Although batch ammonia and leachate additions at 400 mg kg 1 NH4-N similarly boosted the initial CH4 oxidation rate, continuous leachate addition achieved 1.17-2.61 times greater accumulative CH4 consumption than the others at the end of the incubation.

Generated:

Article Title: Microbial drivers of ammonium accumulation in Holocene sediments of the Pearl River Delta.
Article Snippet: .. The raw metagenomic sequencing data generated in this study have been deposited in the National Omics Data Encyclopedia (NODE) under accession code OEP00006863 (https://www.biosino.org/node/browse?keyword=OEP00006863). ..



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